Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA69208.1 | SFA89562.1 | SAMN04488528_100123 | SAMN04488528_1005183 | Hypothetical protein. | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 0.580 |
SFA69208.1 | SFB05069.1 | SAMN04488528_100123 | SAMN04488528_101019 | Hypothetical protein. | Mannose-6-phosphate isomerase, type 1. | 0.509 |
SFA69208.1 | SFB10580.1 | SAMN04488528_100123 | SAMN04488528_101255 | Hypothetical protein. | Riboflavin synthase alpha chain. | 0.502 |
SFA69208.1 | SFB10596.1 | SAMN04488528_100123 | SAMN04488528_101256 | Hypothetical protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.808 |
SFA69208.1 | SFB36041.1 | SAMN04488528_100123 | SAMN04488528_103414 | Hypothetical protein. | Uridine kinase. | 0.650 |
SFA69208.1 | SFB38888.1 | SAMN04488528_100123 | SAMN04488528_104010 | Hypothetical protein. | Hypothetical protein. | 0.527 |
SFA69208.1 | SFB48066.1 | SAMN04488528_100123 | SAMN04488528_11002 | Hypothetical protein. | Hypothetical protein. | 0.519 |
SFA69208.1 | ribBA | SAMN04488528_100123 | SAMN04488528_101254 | Hypothetical protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.597 |
SFA69208.1 | ribH | SAMN04488528_100123 | SAMN04488528_101253 | Hypothetical protein. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.521 |
SFA89562.1 | SFA69208.1 | SAMN04488528_1005183 | SAMN04488528_100123 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | Hypothetical protein. | 0.580 |
SFA89562.1 | SFB10580.1 | SAMN04488528_1005183 | SAMN04488528_101255 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | Riboflavin synthase alpha chain. | 0.932 |
SFA89562.1 | SFB10596.1 | SAMN04488528_1005183 | SAMN04488528_101256 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.884 |
SFA89562.1 | SFB38888.1 | SAMN04488528_1005183 | SAMN04488528_104010 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | Hypothetical protein. | 0.537 |
SFA89562.1 | SFB48066.1 | SAMN04488528_1005183 | SAMN04488528_11002 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | Hypothetical protein. | 0.537 |
SFA89562.1 | ribBA | SAMN04488528_1005183 | SAMN04488528_101254 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.948 |
SFA89562.1 | ribH | SAMN04488528_1005183 | SAMN04488528_101253 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.911 |
SFB05069.1 | SFA69208.1 | SAMN04488528_101019 | SAMN04488528_100123 | Mannose-6-phosphate isomerase, type 1. | Hypothetical protein. | 0.509 |
SFB05069.1 | SFB38888.1 | SAMN04488528_101019 | SAMN04488528_104010 | Mannose-6-phosphate isomerase, type 1. | Hypothetical protein. | 0.500 |
SFB05069.1 | SFB48066.1 | SAMN04488528_101019 | SAMN04488528_11002 | Mannose-6-phosphate isomerase, type 1. | Hypothetical protein. | 0.500 |
SFB10580.1 | SFA69208.1 | SAMN04488528_101255 | SAMN04488528_100123 | Riboflavin synthase alpha chain. | Hypothetical protein. | 0.502 |
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