STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB39990.1Phosphopantetheine attachment site. (566 aa)    
Predicted Functional Partners:
SFB07600.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.999
SFB45437.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.999
SFB47430.1
HxxPF-repeated domain-containing protein.
 0.999
SFB48262.1
Amino acid adenylation domain-containing protein.
 
0.999
SFB48333.1
HxxPF-repeated domain-containing protein.
 0.999
SFB46071.1
Non-ribosomal peptide synthase domain TIGR01720.
0.998
SFB48565.1
Amino acid adenylation domain-containing protein.
0.998
SFA77262.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.997
SFA83621.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
  
 0.997
SFB07894.1
Surfactin synthase thioesterase subunit.
 
 
 0.997
Your Current Organism:
Clostridium frigidicarnis
NCBI taxonomy Id: 84698
Other names: ATCC BAA-154, C. frigidicarnis, DSM 12271, strain SPL77A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.