STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB40208.1Transposase and inactivated derivatives. (226 aa)    
Predicted Functional Partners:
SFB40221.1
Transposase InsO and inactivated derivatives.
    0.882
SFB04140.1
Transposase InsO and inactivated derivatives.
    0.682
SFB09846.1
Transposase InsO and inactivated derivatives.
    0.682
SFB35324.1
Transposase InsO and inactivated derivatives.
    0.682
SFB40186.1
ABC transporter.
       0.506
SFB40197.1
ABC-type multidrug transport system, ATPase and permease component.
       0.506
Your Current Organism:
Clostridium frigidicarnis
NCBI taxonomy Id: 84698
Other names: ATCC BAA-154, C. frigidicarnis, DSM 12271, strain SPL77A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.