Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARQ44807.1 | ARQ45292.1 | BRW83_0030 | BRW83_0525 | Biopolymer transport protein ExbD. | Hypothetical protein. | 0.813 |
ARQ44807.1 | exbB_1 | BRW83_0030 | BRW83_0031 | Biopolymer transport protein ExbD. | Biopolymer transport protein ExbB. | 0.975 |
ARQ44807.1 | hemR | BRW83_0030 | BRW83_1096 | Biopolymer transport protein ExbD. | Hemin receptor. | 0.500 |
ARQ45283.1 | ARQ45292.1 | BRW83_0516 | BRW83_0525 | Hypothetical protein. | Hypothetical protein. | 0.612 |
ARQ45283.1 | ARQ45581.1 | BRW83_0516 | BRW83_0825 | Hypothetical protein. | Hypothetical protein. | 0.561 |
ARQ45283.1 | dapL | BRW83_0516 | BRW83_0925 | Hypothetical protein. | LL-diaminopimelate aminotransferase. | 0.423 |
ARQ45283.1 | exbB_1 | BRW83_0516 | BRW83_0031 | Hypothetical protein. | Biopolymer transport protein ExbB. | 0.470 |
ARQ45283.1 | rnr_1 | BRW83_0516 | BRW83_0524 | Hypothetical protein. | Ribonuclease R. | 0.606 |
ARQ45292.1 | ARQ44807.1 | BRW83_0525 | BRW83_0030 | Hypothetical protein. | Biopolymer transport protein ExbD. | 0.813 |
ARQ45292.1 | ARQ45283.1 | BRW83_0525 | BRW83_0516 | Hypothetical protein. | Hypothetical protein. | 0.612 |
ARQ45292.1 | ARQ45581.1 | BRW83_0525 | BRW83_0825 | Hypothetical protein. | Hypothetical protein. | 0.643 |
ARQ45292.1 | aroE | BRW83_0525 | BRW83_0526 | Hypothetical protein. | Shikimate dehydrogenase (NADP(+)); Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.621 |
ARQ45292.1 | btuB | BRW83_0525 | BRW83_0848 | Hypothetical protein. | Vitamin B12 transporter BtuB. | 0.581 |
ARQ45292.1 | dapL | BRW83_0525 | BRW83_0925 | Hypothetical protein. | LL-diaminopimelate aminotransferase. | 0.579 |
ARQ45292.1 | exbB_1 | BRW83_0525 | BRW83_0031 | Hypothetical protein. | Biopolymer transport protein ExbB. | 0.847 |
ARQ45292.1 | hemR | BRW83_0525 | BRW83_1096 | Hypothetical protein. | Hemin receptor. | 0.750 |
ARQ45292.1 | mtgA | BRW83_0525 | BRW83_0527 | Hypothetical protein. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.615 |
ARQ45292.1 | rnr_1 | BRW83_0525 | BRW83_0524 | Hypothetical protein. | Ribonuclease R. | 0.589 |
ARQ45581.1 | ARQ45283.1 | BRW83_0825 | BRW83_0516 | Hypothetical protein. | Hypothetical protein. | 0.561 |
ARQ45581.1 | ARQ45292.1 | BRW83_0825 | BRW83_0525 | Hypothetical protein. | Hypothetical protein. | 0.643 |
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