STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARQ46310.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
ARQ46312.1
Hypothetical protein.
  
   
0.795
ARQ46311.1
Phage Tail Collar Domain protein.
  
    0.791
ARQ46313.1
Phage Tail Collar Domain protein.
  
    0.791
ARQ46305.1
Hypothetical protein.
       0.773
ARQ46306.1
Hypothetical protein.
       0.773
ARQ46307.1
Hypothetical protein.
       0.773
ARQ46308.1
Hypothetical protein.
       0.773
ARQ46309.1
Hypothetical protein.
       0.773
ARQ46304.1
Hypothetical protein.
       0.746
ARQ46303.1
Hypothetical protein.
       0.698
Your Current Organism:
Oxalobacter formigenes
NCBI taxonomy Id: 847
Other names: ATCC 35274, CIP 106513, O. formigenes, strain OxB
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