STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARQ46404.1Outer membrane porin protein 32. (355 aa)    
Predicted Functional Partners:
ARQ46405.1
Outer membrane porin protein 32.
 
  
 
0.724
ARQ45488.1
Lipoprotein.
  
     0.716
ARQ45531.1
Cell division protein DedD.
  
     0.689
ARQ45036.1
Hypothetical protein.
  
     0.642
ARQ45693.1
Hypothetical protein.
  
     0.642
trxC
Putative thioredoxin-2.
  
     0.619
ARQ46631.1
Outer membrane porin protein.
  
  
 
0.607
ARQ45429.1
Outer membrane porin protein.
  
  
 
0.605
ARQ46603.1
Outer membrane porin protein 32.
  
  
 
0.589
ARQ46599.1
Outer membrane porin protein 32.
  
  
 
0.587
Your Current Organism:
Oxalobacter formigenes
NCBI taxonomy Id: 847
Other names: ATCC 35274, CIP 106513, O. formigenes, strain OxB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.