STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARQ46513.1Extracellular serine protease. (473 aa)    
Predicted Functional Partners:
ARQ46514.1
Extracellular serine protease.
     0.900
ARQ46396.1
Putative autotransporter.
 
  
 0.512
ARQ46262.1
NlpC/P60 family protein.
 
 
 0.508
ftsK
DNA translocase FtsK.
  
 
 0.473
ARQ46354.1
Regulator of chromosome condensation (RCC1) repeat protein.
  
 
 0.468
ARQ46334.1
Regulator of chromosome condensation (RCC1) repeat protein.
  
 
 0.464
ARQ46324.1
Regulator of chromosome condensation (RCC1) repeat protein.
  
 
 0.463
ARQ46341.1
Regulator of chromosome condensation (RCC1) repeat protein.
  
 
 0.463
ARQ45151.1
Hypothetical protein.
  
 
 0.427
ARQ45888.1
Hypothetical protein.
  
 
 0.427
Your Current Organism:
Oxalobacter formigenes
NCBI taxonomy Id: 847
Other names: ATCC 35274, CIP 106513, O. formigenes, strain OxB
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.