Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARQ46651.1 | ARQ46652.1 | BRW83_1911 | BRW83_1912 | Chromosome segregation protein. | Hypothetical protein. | 0.774 |
ARQ46651.1 | ARQ46653.1 | BRW83_1911 | BRW83_1913 | Chromosome segregation protein. | Hypothetical protein. | 0.774 |
ARQ46651.1 | aidA-I | BRW83_1911 | BRW83_1910 | Chromosome segregation protein. | AIDA-I autotransporter. | 0.490 |
ARQ46651.1 | gyrB | BRW83_1911 | BRW83_0291 | Chromosome segregation protein. | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.415 |
ARQ46651.1 | hdaH_1 | BRW83_1911 | BRW83_0375 | Chromosome segregation protein. | Histone deacetylase-like amidohydrolase. | 0.417 |
ARQ46651.1 | hdaH_2 | BRW83_1911 | BRW83_0796 | Chromosome segregation protein. | Histone deacetylase-like amidohydrolase. | 0.417 |
ARQ46651.1 | hdaH_3 | BRW83_1911 | BRW83_1106 | Chromosome segregation protein. | Histone deacetylase-like amidohydrolase. | 0.417 |
ARQ46651.1 | infB | BRW83_1911 | BRW83_0902 | Chromosome segregation protein. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.455 |
ARQ46651.1 | polA | BRW83_1911 | BRW83_0271 | Chromosome segregation protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.497 |
ARQ46651.1 | scpA | BRW83_1911 | BRW83_0853 | Chromosome segregation protein. | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.685 |
ARQ46652.1 | ARQ46651.1 | BRW83_1912 | BRW83_1911 | Hypothetical protein. | Chromosome segregation protein. | 0.774 |
ARQ46652.1 | ARQ46653.1 | BRW83_1912 | BRW83_1913 | Hypothetical protein. | Hypothetical protein. | 0.791 |
ARQ46652.1 | aidA-I | BRW83_1912 | BRW83_1910 | Hypothetical protein. | AIDA-I autotransporter. | 0.423 |
ARQ46653.1 | ARQ46651.1 | BRW83_1913 | BRW83_1911 | Hypothetical protein. | Chromosome segregation protein. | 0.774 |
ARQ46653.1 | ARQ46652.1 | BRW83_1913 | BRW83_1912 | Hypothetical protein. | Hypothetical protein. | 0.791 |
ARQ46653.1 | aidA-I | BRW83_1913 | BRW83_1910 | Hypothetical protein. | AIDA-I autotransporter. | 0.423 |
aidA-I | ARQ46651.1 | BRW83_1910 | BRW83_1911 | AIDA-I autotransporter. | Chromosome segregation protein. | 0.490 |
aidA-I | ARQ46652.1 | BRW83_1910 | BRW83_1912 | AIDA-I autotransporter. | Hypothetical protein. | 0.423 |
aidA-I | ARQ46653.1 | BRW83_1910 | BRW83_1913 | AIDA-I autotransporter. | Hypothetical protein. | 0.423 |
gyrB | ARQ46651.1 | BRW83_0291 | BRW83_1911 | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | Chromosome segregation protein. | 0.415 |
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