STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oprM_3Outer membrane protein OprM. (483 aa)    
Predicted Functional Partners:
acrB
Multidrug efflux pump subunit AcrB.
  0.998
bepE
Efflux pump membrane transporter BepE.
 
  0.992
acrA
Multidrug efflux pump subunit AcrA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.990
ttgA
Toluene efflux pump periplasmic linker protein TtgA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.964
oprM_1
Outer membrane protein OprM.
  
  
 
0.921
tolC
Outer membrane protein TolC.
     
 0.902
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 0.822
mdtB
Multidrug resistance protein MdtB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
   0.804
emrK
Putative multidrug resistance protein EmrK; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.694
mdtC
Multidrug resistance protein MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
   0.672
Your Current Organism:
Oxalobacter formigenes
NCBI taxonomy Id: 847
Other names: ATCC 35274, CIP 106513, O. formigenes, strain OxB
Server load: high (88%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.