Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARQ46890.1 | ansB | BRW83_2154 | BRW83_0378 | Aspartate kinase; Belongs to the aspartokinase family. | Glutaminase-asparaginase. | 0.804 |
ARQ46890.1 | argG | BRW83_2154 | BRW83_0424 | Aspartate kinase; Belongs to the aspartokinase family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.856 |
ARQ46890.1 | asd | BRW83_2154 | BRW83_0757 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.982 |
ARQ46890.1 | dapB | BRW83_2154 | BRW83_0103 | Aspartate kinase; Belongs to the aspartokinase family. | 4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.773 |
ARQ46890.1 | hom | BRW83_2154 | BRW83_1040 | Aspartate kinase; Belongs to the aspartokinase family. | Homoserine dehydrogenase. | 0.969 |
ARQ46890.1 | lysA | BRW83_2154 | BRW83_0043 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.967 |
ARQ46890.1 | nadB | BRW83_2154 | BRW83_1212 | Aspartate kinase; Belongs to the aspartokinase family. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.802 |
ARQ46890.1 | purA | BRW83_2154 | BRW83_2078 | Aspartate kinase; Belongs to the aspartokinase family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.821 |
ARQ46890.1 | pyrB | BRW83_2154 | BRW83_0829 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.800 |
ARQ46890.1 | thrC | BRW83_2154 | BRW83_1013 | Aspartate kinase; Belongs to the aspartokinase family. | Threonine synthase. | 0.828 |
ansB | ARQ46890.1 | BRW83_0378 | BRW83_2154 | Glutaminase-asparaginase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.804 |
ansB | argG | BRW83_0378 | BRW83_0424 | Glutaminase-asparaginase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.905 |
ansB | nadB | BRW83_0378 | BRW83_1212 | Glutaminase-asparaginase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.913 |
ansB | purA | BRW83_0378 | BRW83_2078 | Glutaminase-asparaginase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.900 |
ansB | pyrB | BRW83_0378 | BRW83_0829 | Glutaminase-asparaginase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.900 |
argG | ARQ46890.1 | BRW83_0424 | BRW83_2154 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate kinase; Belongs to the aspartokinase family. | 0.856 |
argG | ansB | BRW83_0424 | BRW83_0378 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Glutaminase-asparaginase. | 0.905 |
argG | asd | BRW83_0424 | BRW83_0757 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.419 |
argG | lysA | BRW83_0424 | BRW83_0043 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.427 |
argG | nadB | BRW83_0424 | BRW83_1212 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.911 |
page 1 of 3