STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARQ46898.1AsmA family protein. (1120 aa)    
Predicted Functional Partners:
ARQ46899.1
OmpA family protein.
 
  
0.680
ARQ45098.1
Hypothetical protein.
  
     0.559
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.511
ARQ45019.1
Hypothetical protein.
  
 
   0.509
lolB
Outer-membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
  
 
 0.498
tolA
Cell envelope integrity inner membrane protein TolA.
  
 
   0.481
ARQ45531.1
Cell division protein DedD.
 
   
 0.471
pagL
Lipid A deacylase PagL; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
 
 0.446
ARQ45151.1
Hypothetical protein.
  
 
   0.434
skp
Chaperone protein Skp; Belongs to the skp family.
  
 
 0.432
Your Current Organism:
Oxalobacter formigenes
NCBI taxonomy Id: 847
Other names: ATCC 35274, CIP 106513, O. formigenes, strain OxB
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.