STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ97219.1Magnesium chelatase subunit I. (463 aa)    
Predicted Functional Partners:
SFQ97216.1
Uncharacterized protein, contains von Willebrand factor type A (vWA) domain.
 
    0.976
SFR21327.1
Protoporphyrin IX magnesium-chelatase.
  
0.965
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
 
 0.929
SFR28858.1
Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.919
SFR24714.1
Cobaltochelatase CobN subunit.
  
 
 0.843
SFQ97342.1
Ca-activated chloride channel family protein.
 
 0.842
SFR06279.1
Ca-activated chloride channel family protein.
  
 0.819
SFQ96367.1
VWA domain containing CoxE-like protein.
  
 0.817
SFQ97262.1
Mg-chelatase subunit ChlD.
  
 0.817
SFR03857.1
Von Willebrand factor type A domain-containing protein.
  
 0.817
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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