STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR11525.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
SFR11531.1
PAS domain S-box-containing protein.
 
   
 0.794
SFR11543.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
  0.779
SFR11537.1
Response regulator receiver domain-containing protein.
       0.745
SFR28307.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.714
SFR24763.1
PAS domain S-box-containing protein.
 
 0.671
SFR28197.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.652
SFR10648.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.643
SFR05091.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
  0.635
SFQ95968.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
  0.634
SFR28576.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
  0.634
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.