STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR15287.1Zinc/manganese transport system permease protein. (271 aa)    
Predicted Functional Partners:
SFR15290.1
Zinc/manganese transport system ATP-binding protein.
 
 0.999
SFR15293.1
Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.998
SFR26543.1
Threonine synthase.
    
  0.673
SFR29213.1
Threonine synthase.
    
  0.673
SFR15296.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
    
  0.653
SFR17939.1
AAA ATPase domain-containing protein.
  
 
 0.647
SFR23627.1
Iron (metal) dependent repressor, DtxR family.
  
 
 0.647
SFR11803.1
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
    
  0.639
SFR29029.1
Manganese transport protein.
  
  
 0.588
SFR24331.1
Zinc uptake regulator, Fur family; Belongs to the Fur family.
  
  
 0.566
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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