Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR09660.1 | SFR14928.1 | SAMN04488564_103194 | SAMN04488564_10429 | FO synthase subunit 1 /FO synthase subunit 2. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.581 |
SFR09660.1 | SFR14952.1 | SAMN04488564_103194 | SAMN04488564_10434 | FO synthase subunit 1 /FO synthase subunit 2. | Sulfur carrier protein. | 0.901 |
SFR09660.1 | SFR24950.1 | SAMN04488564_103194 | SAMN04488564_108156 | FO synthase subunit 1 /FO synthase subunit 2. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.605 |
SFR09660.1 | SFR26644.1 | SAMN04488564_103194 | SAMN04488564_11098 | FO synthase subunit 1 /FO synthase subunit 2. | Adenylyltransferase and sulfurtransferase. | 0.740 |
SFR09660.1 | thiC | SAMN04488564_103194 | SAMN04488564_10428 | FO synthase subunit 1 /FO synthase subunit 2. | Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. | 0.915 |
SFR09660.1 | thiE | SAMN04488564_103194 | SAMN04488564_10437 | FO synthase subunit 1 /FO synthase subunit 2. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.905 |
SFR09660.1 | thiG | SAMN04488564_103194 | SAMN04488564_10433 | FO synthase subunit 1 /FO synthase subunit 2. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.987 |
SFR14928.1 | SFR09660.1 | SAMN04488564_10429 | SAMN04488564_103194 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | FO synthase subunit 1 /FO synthase subunit 2. | 0.581 |
SFR14928.1 | SFR14952.1 | SAMN04488564_10429 | SAMN04488564_10434 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Sulfur carrier protein. | 0.963 |
SFR14928.1 | SFR14958.1 | SAMN04488564_10429 | SAMN04488564_10435 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Glycine oxidase. | 0.789 |
SFR14928.1 | SFR24950.1 | SAMN04488564_10429 | SAMN04488564_108156 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.672 |
SFR14928.1 | SFR26644.1 | SAMN04488564_10429 | SAMN04488564_11098 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Adenylyltransferase and sulfurtransferase. | 0.796 |
SFR14928.1 | thiC | SAMN04488564_10429 | SAMN04488564_10428 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. | 0.999 |
SFR14928.1 | thiE | SAMN04488564_10429 | SAMN04488564_10437 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.998 |
SFR14928.1 | thiG | SAMN04488564_10429 | SAMN04488564_10433 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.990 |
SFR14952.1 | SFR09660.1 | SAMN04488564_10434 | SAMN04488564_103194 | Sulfur carrier protein. | FO synthase subunit 1 /FO synthase subunit 2. | 0.901 |
SFR14952.1 | SFR14928.1 | SAMN04488564_10434 | SAMN04488564_10429 | Sulfur carrier protein. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.963 |
SFR14952.1 | SFR14958.1 | SAMN04488564_10434 | SAMN04488564_10435 | Sulfur carrier protein. | Glycine oxidase. | 0.973 |
SFR14952.1 | SFR22612.1 | SAMN04488564_10434 | SAMN04488564_106267 | Sulfur carrier protein. | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | 0.952 |
SFR14952.1 | SFR24950.1 | SAMN04488564_10434 | SAMN04488564_108156 | Sulfur carrier protein. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.982 |
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