STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR17890.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
SFR05875.1
TIR domain-containing protein.
  
 
   0.787
SFR29226.1
Ig-like domain (group 3).
  
     0.769
SFR28712.1
alpha-N-arabinofuranosidase.
  
     0.757
SFR08781.1
Hypothetical protein.
  
     0.756
SFR16792.1
Cna protein B-type domain-containing protein.
  
     0.755
SFR28620.1
Regulatory protein, luxR family.
  
     0.753
SFQ97086.1
Deoxyribonuclease NucA/NucB.
  
     0.752
SFR06959.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.749
SFR23615.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
     0.747
SFR16938.1
Hypothetical protein.
  
     0.745
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.