STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR20461.1Predicted ATPase. (721 aa)    
Predicted Functional Partners:
SFR21357.1
NB-ARC domain-containing protein.
 
    0.752
SFR28041.1
DNA-binding transcriptional activator of the SARP family.
 
    0.730
SFR28505.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
    0.692
SFR22262.1
DNA-binding transcriptional activator of the SARP family.
 
    0.691
SFR20984.1
Transcriptional activator domain-containing protein.
 
    0.658
SFQ96296.1
DNA-binding transcriptional activator of the SARP family.
 
    0.642
SFR22481.1
DNA-binding transcriptional activator of the SARP family.
 
    0.642
SFR24233.1
DNA-binding transcriptional activator of the SARP family.
  
    0.634
SFR05857.1
Tetratricopeptide repeat-containing protein.
 
    0.618
SFR11858.1
DNA-binding transcriptional activator of the SARP family.
    0.607
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.