STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR20858.1Hypothetical protein. (514 aa)    
Predicted Functional Partners:
hisH
Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
       0.790
hisA
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.
       0.789
SFR20864.1
Hypothetical protein.
       0.779
SFQ99475.1
Amino acid adenylation domain-containing protein.
   
  0.741
SFR28059.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
  0.741
SFR29121.1
Amino acid adenylation domain-containing protein.
   
  0.741
SFR28737.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
  0.740
SFR29119.1
Phosphopantetheine attachment site.
    
  0.720
SFR02627.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
    
  0.651
SFR24030.1
Phosphopantetheine attachment site.
    
  0.651
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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