Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFQ96680.1 | SFR02684.1 | SAMN04488564_101309 | SAMN04488564_102158 | Carbohydrate binding module (family 35). | Helix-turn-helix domain-containing protein. | 0.566 |
SFQ96680.1 | SFR08781.1 | SAMN04488564_101309 | SAMN04488564_10310 | Carbohydrate binding module (family 35). | Hypothetical protein. | 0.629 |
SFQ96680.1 | SFR10859.1 | SAMN04488564_101309 | SAMN04488564_103485 | Carbohydrate binding module (family 35). | Hypothetical protein. | 0.863 |
SFQ96680.1 | SFR22384.1 | SAMN04488564_101309 | SAMN04488564_106155 | Carbohydrate binding module (family 35). | Hypothetical protein. | 0.755 |
SFQ96680.1 | SFR22388.1 | SAMN04488564_101309 | SAMN04488564_106156 | Carbohydrate binding module (family 35). | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.733 |
SFQ96680.1 | SFR22648.1 | SAMN04488564_101309 | SAMN04488564_106292 | Carbohydrate binding module (family 35). | Hypothetical protein. | 0.817 |
SFQ96680.1 | SFR28372.1 | SAMN04488564_101309 | SAMN04488564_113220 | Carbohydrate binding module (family 35). | Hypothetical protein. | 0.855 |
SFR02684.1 | SFQ96680.1 | SAMN04488564_102158 | SAMN04488564_101309 | Helix-turn-helix domain-containing protein. | Carbohydrate binding module (family 35). | 0.566 |
SFR02684.1 | SFR08781.1 | SAMN04488564_102158 | SAMN04488564_10310 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.527 |
SFR02684.1 | SFR10859.1 | SAMN04488564_102158 | SAMN04488564_103485 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.481 |
SFR02684.1 | SFR22384.1 | SAMN04488564_102158 | SAMN04488564_106155 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.725 |
SFR02684.1 | SFR22388.1 | SAMN04488564_102158 | SAMN04488564_106156 | Helix-turn-helix domain-containing protein. | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.436 |
SFR02684.1 | SFR22648.1 | SAMN04488564_102158 | SAMN04488564_106292 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.445 |
SFR02684.1 | SFR28372.1 | SAMN04488564_102158 | SAMN04488564_113220 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.630 |
SFR02684.1 | SFR28450.1 | SAMN04488564_102158 | SAMN04488564_11411 | Helix-turn-helix domain-containing protein. | alpha-L-fucosidase. | 0.706 |
SFR08781.1 | SFQ96680.1 | SAMN04488564_10310 | SAMN04488564_101309 | Hypothetical protein. | Carbohydrate binding module (family 35). | 0.629 |
SFR08781.1 | SFR02684.1 | SAMN04488564_10310 | SAMN04488564_102158 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.527 |
SFR08781.1 | SFR22384.1 | SAMN04488564_10310 | SAMN04488564_106155 | Hypothetical protein. | Hypothetical protein. | 0.681 |
SFR08781.1 | SFR22388.1 | SAMN04488564_10310 | SAMN04488564_106156 | Hypothetical protein. | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.618 |
SFR08781.1 | SFR28450.1 | SAMN04488564_10310 | SAMN04488564_11411 | Hypothetical protein. | alpha-L-fucosidase. | 0.514 |
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