Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFQ98865.1 | SFR22652.1 | SAMN04488564_101727 | SAMN04488564_106294 | Acyl transferase domain-containing protein. | Methyltransferase domain-containing protein. | 0.697 |
| SFQ98865.1 | SFR22654.1 | SAMN04488564_101727 | SAMN04488564_106295 | Acyl transferase domain-containing protein. | Para-nitrobenzyl esterase. | 0.650 |
| SFQ98865.1 | SFR22656.1 | SAMN04488564_101727 | SAMN04488564_106296 | Acyl transferase domain-containing protein. | Threonine dehydrogenase. | 0.740 |
| SFQ98865.1 | rpsD | SAMN04488564_101727 | SAMN04488564_10348 | Acyl transferase domain-containing protein. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.623 |
| SFQ98865.1 | rpsK | SAMN04488564_101727 | SAMN04488564_10347 | Acyl transferase domain-containing protein. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.540 |
| SFR05310.1 | SFR22654.1 | SAMN04488564_102762 | SAMN04488564_106295 | Hypothetical protein. | Para-nitrobenzyl esterase. | 0.451 |
| SFR22112.1 | SFR22654.1 | SAMN04488564_10665 | SAMN04488564_106295 | ATP-dependent helicase HrpB. | Para-nitrobenzyl esterase. | 0.433 |
| SFR22112.1 | SFR28863.1 | SAMN04488564_10665 | SAMN04488564_115172 | ATP-dependent helicase HrpB. | Ribonuclease D. | 0.976 |
| SFR22112.1 | rpsD | SAMN04488564_10665 | SAMN04488564_10348 | ATP-dependent helicase HrpB. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.971 |
| SFR22112.1 | rpsK | SAMN04488564_10665 | SAMN04488564_10347 | ATP-dependent helicase HrpB. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.959 |
| SFR22652.1 | SFQ98865.1 | SAMN04488564_106294 | SAMN04488564_101727 | Methyltransferase domain-containing protein. | Acyl transferase domain-containing protein. | 0.697 |
| SFR22652.1 | SFR22654.1 | SAMN04488564_106294 | SAMN04488564_106295 | Methyltransferase domain-containing protein. | Para-nitrobenzyl esterase. | 0.781 |
| SFR22652.1 | SFR22656.1 | SAMN04488564_106294 | SAMN04488564_106296 | Methyltransferase domain-containing protein. | Threonine dehydrogenase. | 0.546 |
| SFR22654.1 | SFQ98865.1 | SAMN04488564_106295 | SAMN04488564_101727 | Para-nitrobenzyl esterase. | Acyl transferase domain-containing protein. | 0.650 |
| SFR22654.1 | SFR05310.1 | SAMN04488564_106295 | SAMN04488564_102762 | Para-nitrobenzyl esterase. | Hypothetical protein. | 0.451 |
| SFR22654.1 | SFR22112.1 | SAMN04488564_106295 | SAMN04488564_10665 | Para-nitrobenzyl esterase. | ATP-dependent helicase HrpB. | 0.433 |
| SFR22654.1 | SFR22652.1 | SAMN04488564_106295 | SAMN04488564_106294 | Para-nitrobenzyl esterase. | Methyltransferase domain-containing protein. | 0.781 |
| SFR22654.1 | SFR22656.1 | SAMN04488564_106295 | SAMN04488564_106296 | Para-nitrobenzyl esterase. | Threonine dehydrogenase. | 0.544 |
| SFR22654.1 | SFR27464.1 | SAMN04488564_106295 | SAMN04488564_11163 | Para-nitrobenzyl esterase. | ATP-dependent helicase HrpA. | 0.433 |
| SFR22654.1 | SFR28863.1 | SAMN04488564_106295 | SAMN04488564_115172 | Para-nitrobenzyl esterase. | Ribonuclease D. | 0.528 |
page 1 of 3