Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR05293.1 | SFR06484.1 | SAMN04488564_102748 | SAMN04488564_1021014 | ABC-type branched-chain amino acid transport system, substrate-binding protein. | Hypothetical protein. | 0.685 |
SFR05293.1 | SFR09091.1 | SAMN04488564_102748 | SAMN04488564_10374 | ABC-type branched-chain amino acid transport system, substrate-binding protein. | Hypothetical protein. | 0.727 |
SFR05293.1 | SFR16492.1 | SAMN04488564_102748 | SAMN04488564_104389 | ABC-type branched-chain amino acid transport system, substrate-binding protein. | Hypothetical protein. | 0.736 |
SFR05293.1 | SFR22544.1 | SAMN04488564_102748 | SAMN04488564_106226 | ABC-type branched-chain amino acid transport system, substrate-binding protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.615 |
SFR05293.1 | SFR22747.1 | SAMN04488564_102748 | SAMN04488564_106345 | ABC-type branched-chain amino acid transport system, substrate-binding protein. | Hypothetical protein. | 0.756 |
SFR05293.1 | SFR22752.1 | SAMN04488564_102748 | SAMN04488564_106347 | ABC-type branched-chain amino acid transport system, substrate-binding protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.751 |
SFR05293.1 | SFR28435.1 | SAMN04488564_102748 | SAMN04488564_113283 | ABC-type branched-chain amino acid transport system, substrate-binding protein. | Hypothetical protein. | 0.734 |
SFR05293.1 | SFR28451.1 | SAMN04488564_102748 | SAMN04488564_11412 | ABC-type branched-chain amino acid transport system, substrate-binding protein. | Hypothetical protein. | 0.690 |
SFR06484.1 | SFR05293.1 | SAMN04488564_1021014 | SAMN04488564_102748 | Hypothetical protein. | ABC-type branched-chain amino acid transport system, substrate-binding protein. | 0.685 |
SFR06484.1 | SFR09091.1 | SAMN04488564_1021014 | SAMN04488564_10374 | Hypothetical protein. | Hypothetical protein. | 0.628 |
SFR06484.1 | SFR16492.1 | SAMN04488564_1021014 | SAMN04488564_104389 | Hypothetical protein. | Hypothetical protein. | 0.706 |
SFR06484.1 | SFR22544.1 | SAMN04488564_1021014 | SAMN04488564_106226 | Hypothetical protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.492 |
SFR06484.1 | SFR22747.1 | SAMN04488564_1021014 | SAMN04488564_106345 | Hypothetical protein. | Hypothetical protein. | 0.738 |
SFR06484.1 | SFR22752.1 | SAMN04488564_1021014 | SAMN04488564_106347 | Hypothetical protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.697 |
SFR06484.1 | SFR28435.1 | SAMN04488564_1021014 | SAMN04488564_113283 | Hypothetical protein. | Hypothetical protein. | 0.713 |
SFR06484.1 | SFR28451.1 | SAMN04488564_1021014 | SAMN04488564_11412 | Hypothetical protein. | Hypothetical protein. | 0.621 |
SFR09091.1 | SFR05293.1 | SAMN04488564_10374 | SAMN04488564_102748 | Hypothetical protein. | ABC-type branched-chain amino acid transport system, substrate-binding protein. | 0.727 |
SFR09091.1 | SFR06484.1 | SAMN04488564_10374 | SAMN04488564_1021014 | Hypothetical protein. | Hypothetical protein. | 0.628 |
SFR09091.1 | SFR16492.1 | SAMN04488564_10374 | SAMN04488564_104389 | Hypothetical protein. | Hypothetical protein. | 0.720 |
SFR09091.1 | SFR22544.1 | SAMN04488564_10374 | SAMN04488564_106226 | Hypothetical protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.725 |
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