Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFQ99853.1 | SFR24238.1 | SAMN04488564_101943 | SAMN04488564_107364 | Cytochrome P450. | Ferredoxin. | 0.601 |
SFR24237.1 | SFR24238.1 | SAMN04488564_107363 | SAMN04488564_107364 | Hypothetical protein. | Ferredoxin. | 0.412 |
SFR24237.1 | SFR24240.1 | SAMN04488564_107363 | SAMN04488564_107365 | Hypothetical protein. | Cytochrome P450. | 0.412 |
SFR24238.1 | SFQ99853.1 | SAMN04488564_107364 | SAMN04488564_101943 | Ferredoxin. | Cytochrome P450. | 0.601 |
SFR24238.1 | SFR24237.1 | SAMN04488564_107364 | SAMN04488564_107363 | Ferredoxin. | Hypothetical protein. | 0.412 |
SFR24238.1 | SFR24240.1 | SAMN04488564_107364 | SAMN04488564_107365 | Ferredoxin. | Cytochrome P450. | 0.823 |
SFR24238.1 | SFR24242.1 | SAMN04488564_107364 | SAMN04488564_107366 | Ferredoxin. | DNA-binding transcriptional regulator, AcrR family. | 0.564 |
SFR24238.1 | SFR30010.1 | SAMN04488564_107364 | SAMN04488564_12562 | Ferredoxin. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.820 |
SFR24240.1 | SFR24237.1 | SAMN04488564_107365 | SAMN04488564_107363 | Cytochrome P450. | Hypothetical protein. | 0.412 |
SFR24240.1 | SFR24238.1 | SAMN04488564_107365 | SAMN04488564_107364 | Cytochrome P450. | Ferredoxin. | 0.823 |
SFR24240.1 | SFR24242.1 | SAMN04488564_107365 | SAMN04488564_107366 | Cytochrome P450. | DNA-binding transcriptional regulator, AcrR family. | 0.564 |
SFR24242.1 | SFR24238.1 | SAMN04488564_107366 | SAMN04488564_107364 | DNA-binding transcriptional regulator, AcrR family. | Ferredoxin. | 0.564 |
SFR24242.1 | SFR24240.1 | SAMN04488564_107366 | SAMN04488564_107365 | DNA-binding transcriptional regulator, AcrR family. | Cytochrome P450. | 0.564 |
SFR30010.1 | SFR24238.1 | SAMN04488564_12562 | SAMN04488564_107364 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Ferredoxin. | 0.820 |