STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR24289.1Hypothetical protein. (93 aa)    
Predicted Functional Partners:
SFR28857.1
Chlorite dismutase.
    
  0.727
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
  0.651
SFR22946.1
Putative membrane protein.
 
    0.588
SFR06316.1
Osmoprotectant transport system substrate-binding protein.
  
    0.489
SFR10675.1
Osmoprotectant transport system substrate-binding protein.
  
    0.489
SFR22311.1
Osmoprotectant transport system substrate-binding protein.
  
    0.489
SFQ95116.1
Protein-tyrosine phosphatase.
  
     0.463
SFR24687.1
Putative Holin-X, holin superfamily III.
 
    0.452
SFR10013.1
PH domain-containing protein.
  
    0.433
SFR26717.1
PH domain-containing protein.
  
    0.433
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.