STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR25175.1Tetratricopeptide repeat-containing protein. (664 aa)    
Predicted Functional Partners:
SFR06445.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
   
   0.969
SFQ99475.1
Amino acid adenylation domain-containing protein.
   
 
 0.923
SFR28059.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.923
SFR29121.1
Amino acid adenylation domain-containing protein.
   
 
 0.923
SFR24030.1
Phosphopantetheine attachment site.
   
 
 0.909
SFR28737.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.909
SFR02627.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 
 0.908
SFR02631.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
    
 
 0.903
SFQ96850.1
Hypothetical protein.
 
 0.891
rplQ
Large subunit ribosomal protein L17.
  
   0.882
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.