Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR10718.1 | SFR25183.1 | SAMN04488564_103455 | SAMN04488564_108253 | N-carbamoyl-L-amino-acid hydrolase. | Dihydropyrimidinase. | 0.932 |
SFR10718.1 | SFR25186.1 | SAMN04488564_103455 | SAMN04488564_108254 | N-carbamoyl-L-amino-acid hydrolase. | N-carbamoylputrescine amidase. | 0.892 |
SFR10718.1 | SFR25188.1 | SAMN04488564_103455 | SAMN04488564_108255 | N-carbamoyl-L-amino-acid hydrolase. | Nucleobase:cation symporter-1, NCS1 family. | 0.413 |
SFR10718.1 | alc | SAMN04488564_103455 | SAMN04488564_103951 | N-carbamoyl-L-amino-acid hydrolase. | Allantoicase; Belongs to the allantoicase family. | 0.618 |
SFR10718.1 | carB | SAMN04488564_103455 | SAMN04488564_101492 | N-carbamoyl-L-amino-acid hydrolase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.530 |
SFR10718.1 | pyrB | SAMN04488564_103455 | SAMN04488564_101496 | N-carbamoyl-L-amino-acid hydrolase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.475 |
SFR10718.1 | pyrD | SAMN04488564_103455 | SAMN04488564_105467 | N-carbamoyl-L-amino-acid hydrolase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.861 |
SFR25180.1 | SFR25183.1 | SAMN04488564_108252 | SAMN04488564_108253 | F420-dependent oxidoreductase, CPS_4043 family. | Dihydropyrimidinase. | 0.942 |
SFR25180.1 | SFR25186.1 | SAMN04488564_108252 | SAMN04488564_108254 | F420-dependent oxidoreductase, CPS_4043 family. | N-carbamoylputrescine amidase. | 0.939 |
SFR25180.1 | SFR25188.1 | SAMN04488564_108252 | SAMN04488564_108255 | F420-dependent oxidoreductase, CPS_4043 family. | Nucleobase:cation symporter-1, NCS1 family. | 0.837 |
SFR25183.1 | SFR10718.1 | SAMN04488564_108253 | SAMN04488564_103455 | Dihydropyrimidinase. | N-carbamoyl-L-amino-acid hydrolase. | 0.932 |
SFR25183.1 | SFR25180.1 | SAMN04488564_108253 | SAMN04488564_108252 | Dihydropyrimidinase. | F420-dependent oxidoreductase, CPS_4043 family. | 0.942 |
SFR25183.1 | SFR25186.1 | SAMN04488564_108253 | SAMN04488564_108254 | Dihydropyrimidinase. | N-carbamoylputrescine amidase. | 0.998 |
SFR25183.1 | SFR25188.1 | SAMN04488564_108253 | SAMN04488564_108255 | Dihydropyrimidinase. | Nucleobase:cation symporter-1, NCS1 family. | 0.942 |
SFR25183.1 | alc | SAMN04488564_108253 | SAMN04488564_103951 | Dihydropyrimidinase. | Allantoicase; Belongs to the allantoicase family. | 0.919 |
SFR25183.1 | carA | SAMN04488564_108253 | SAMN04488564_101493 | Dihydropyrimidinase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.920 |
SFR25183.1 | carB | SAMN04488564_108253 | SAMN04488564_101492 | Dihydropyrimidinase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.926 |
SFR25183.1 | pyrB | SAMN04488564_108253 | SAMN04488564_101496 | Dihydropyrimidinase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.994 |
SFR25183.1 | pyrD | SAMN04488564_108253 | SAMN04488564_105467 | Dihydropyrimidinase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.975 |
SFR25183.1 | pyrR | SAMN04488564_108253 | SAMN04488564_101497 | Dihydropyrimidinase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.927 |
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