Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR09954.1 | SFR15189.1 | SAMN04488564_103278 | SAMN04488564_10482 | Protein of unknown function. | DNA-binding transcriptional activator of the SARP family. | 0.526 |
SFR09954.1 | SFR20723.1 | SAMN04488564_103278 | SAMN04488564_105314 | Protein of unknown function. | DNA-binding transcriptional activator of the SARP family. | 0.459 |
SFR09954.1 | SFR25417.1 | SAMN04488564_103278 | SAMN04488564_108373 | Protein of unknown function. | DNA-binding transcriptional regulator GbsR, MarR family. | 0.544 |
SFR09954.1 | SFR26600.1 | SAMN04488564_103278 | SAMN04488564_11078 | Protein of unknown function. | Hypothetical protein. | 0.774 |
SFR09954.1 | SFR27091.1 | SAMN04488564_103278 | SAMN04488564_110313 | Protein of unknown function. | Hypothetical protein. | 0.742 |
SFR15189.1 | SFR09954.1 | SAMN04488564_10482 | SAMN04488564_103278 | DNA-binding transcriptional activator of the SARP family. | Protein of unknown function. | 0.526 |
SFR15189.1 | SFR25413.1 | SAMN04488564_10482 | SAMN04488564_108369 | DNA-binding transcriptional activator of the SARP family. | Helix-turn-helix domain-containing protein. | 0.485 |
SFR15189.1 | SFR25417.1 | SAMN04488564_10482 | SAMN04488564_108373 | DNA-binding transcriptional activator of the SARP family. | DNA-binding transcriptional regulator GbsR, MarR family. | 0.551 |
SFR15189.1 | SFR26600.1 | SAMN04488564_10482 | SAMN04488564_11078 | DNA-binding transcriptional activator of the SARP family. | Hypothetical protein. | 0.474 |
SFR20723.1 | SFR09954.1 | SAMN04488564_105314 | SAMN04488564_103278 | DNA-binding transcriptional activator of the SARP family. | Protein of unknown function. | 0.459 |
SFR20723.1 | SFR25417.1 | SAMN04488564_105314 | SAMN04488564_108373 | DNA-binding transcriptional activator of the SARP family. | DNA-binding transcriptional regulator GbsR, MarR family. | 0.537 |
SFR20723.1 | SFR26600.1 | SAMN04488564_105314 | SAMN04488564_11078 | DNA-binding transcriptional activator of the SARP family. | Hypothetical protein. | 0.431 |
SFR25413.1 | SFR15189.1 | SAMN04488564_108369 | SAMN04488564_10482 | Helix-turn-helix domain-containing protein. | DNA-binding transcriptional activator of the SARP family. | 0.485 |
SFR25413.1 | SFR25414.1 | SAMN04488564_108369 | SAMN04488564_108370 | Helix-turn-helix domain-containing protein. | Protein of unknown function. | 0.773 |
SFR25413.1 | SFR25415.1 | SAMN04488564_108369 | SAMN04488564_108371 | Helix-turn-helix domain-containing protein. | SCP1.201-like deaminase. | 0.732 |
SFR25413.1 | SFR25416.1 | SAMN04488564_108369 | SAMN04488564_108372 | Helix-turn-helix domain-containing protein. | Immunity protein Imm1. | 0.732 |
SFR25413.1 | SFR25417.1 | SAMN04488564_108369 | SAMN04488564_108373 | Helix-turn-helix domain-containing protein. | DNA-binding transcriptional regulator GbsR, MarR family. | 0.562 |
SFR25413.1 | SFR25418.1 | SAMN04488564_108369 | SAMN04488564_108374 | Helix-turn-helix domain-containing protein. | Ankyrin repeat. | 0.555 |
SFR25414.1 | SFR25413.1 | SAMN04488564_108370 | SAMN04488564_108369 | Protein of unknown function. | Helix-turn-helix domain-containing protein. | 0.773 |
SFR25414.1 | SFR25415.1 | SAMN04488564_108370 | SAMN04488564_108371 | Protein of unknown function. | SCP1.201-like deaminase. | 0.732 |
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