STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR25691.1Protein N-acetyltransferase, RimJ/RimL family. (158 aa)    
Predicted Functional Partners:
SFR25690.1
Putative esterase.
       0.787
SFQ95196.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
  0.731
SFR20805.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.729
SFR30010.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.650
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
  0.638
SFR25687.1
DNA-binding transcriptional regulator, AcrR family.
       0.565
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
  0.510
SFR25684.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
    
  0.502
SFR23072.1
L-ornithine N5-oxygenase.
  
 
 0.499
SFR28334.1
L-ornithine N5-oxygenase.
  
 
 0.499
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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