STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR25797.1Hypothetical protein. (278 aa)    
Predicted Functional Partners:
SFR11211.1
Chitinase family 18; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.721
SFQ96656.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.710
SFR18240.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
  0.673
SFR30137.1
Hypothetical protein.
  
 
 0.642
SFR05745.1
Endo-1,4-beta-xylanase.
 
  
  0.631
SFQ95169.1
Chitinase, GH18 family; Belongs to the glycosyl hydrolase 18 family.
 
 
  0.612
SFR29685.1
Chitinase family 18.
 
 
  0.604
SFR20482.1
Chitinase family 18.
 
 
  0.599
SFR09842.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
  0.584
SFR28416.1
Ricin-type beta-trefoil lectin domain-like.
  
  
  0.569
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.