STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR26856.1NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (114 aa)    
Predicted Functional Partners:
SFR30010.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 0.988
SFR26855.1
Succinyldiaminopimelate transaminase.
  
 0.960
cysC
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
  
 
 0.927
SFR06445.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
    
 0.921
SFR20805.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.903
SFQ99260.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
  
 0.883
SFR04803.1
3-oxosteroid 1-dehydrogenase.
  
 0.883
SFR04953.1
3-oxo-5alpha-steroid 4-dehydrogenase.
  
 0.883
SFR04957.1
3-oxosteroid 1-dehydrogenase.
  
 0.883
SFR05116.1
FAD dependent oxidoreductase.
  
 0.883
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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