Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFQ99260.1 | SFR06445.1 | SAMN04488564_101816 | SAMN04488564_1021008 | Succinate dehydrogenase / fumarate reductase flavoprotein subunit. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.982 |
SFQ99260.1 | SFR20805.1 | SAMN04488564_101816 | SAMN04488564_105339 | Succinate dehydrogenase / fumarate reductase flavoprotein subunit. | Glutamate synthase (NADPH/NADH) large chain. | 0.464 |
SFQ99260.1 | SFR26855.1 | SAMN04488564_101816 | SAMN04488564_110199 | Succinate dehydrogenase / fumarate reductase flavoprotein subunit. | Succinyldiaminopimelate transaminase. | 0.402 |
SFQ99260.1 | SFR26856.1 | SAMN04488564_101816 | SAMN04488564_110200 | Succinate dehydrogenase / fumarate reductase flavoprotein subunit. | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.883 |
SFQ99260.1 | SFR30010.1 | SAMN04488564_101816 | SAMN04488564_12562 | Succinate dehydrogenase / fumarate reductase flavoprotein subunit. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.924 |
SFQ99260.1 | cysC | SAMN04488564_101816 | SAMN04488564_101833 | Succinate dehydrogenase / fumarate reductase flavoprotein subunit. | Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | 0.806 |
SFR04803.1 | SFR04953.1 | SAMN04488564_102617 | SAMN04488564_102655 | 3-oxosteroid 1-dehydrogenase. | 3-oxo-5alpha-steroid 4-dehydrogenase. | 0.957 |
SFR04803.1 | SFR04957.1 | SAMN04488564_102617 | SAMN04488564_102656 | 3-oxosteroid 1-dehydrogenase. | 3-oxosteroid 1-dehydrogenase. | 0.821 |
SFR04803.1 | SFR06445.1 | SAMN04488564_102617 | SAMN04488564_1021008 | 3-oxosteroid 1-dehydrogenase. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.982 |
SFR04803.1 | SFR20805.1 | SAMN04488564_102617 | SAMN04488564_105339 | 3-oxosteroid 1-dehydrogenase. | Glutamate synthase (NADPH/NADH) large chain. | 0.464 |
SFR04803.1 | SFR26855.1 | SAMN04488564_102617 | SAMN04488564_110199 | 3-oxosteroid 1-dehydrogenase. | Succinyldiaminopimelate transaminase. | 0.402 |
SFR04803.1 | SFR26856.1 | SAMN04488564_102617 | SAMN04488564_110200 | 3-oxosteroid 1-dehydrogenase. | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.883 |
SFR04803.1 | SFR30010.1 | SAMN04488564_102617 | SAMN04488564_12562 | 3-oxosteroid 1-dehydrogenase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.924 |
SFR04803.1 | cysC | SAMN04488564_102617 | SAMN04488564_101833 | 3-oxosteroid 1-dehydrogenase. | Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | 0.806 |
SFR04953.1 | SFR04803.1 | SAMN04488564_102655 | SAMN04488564_102617 | 3-oxo-5alpha-steroid 4-dehydrogenase. | 3-oxosteroid 1-dehydrogenase. | 0.957 |
SFR04953.1 | SFR04957.1 | SAMN04488564_102655 | SAMN04488564_102656 | 3-oxo-5alpha-steroid 4-dehydrogenase. | 3-oxosteroid 1-dehydrogenase. | 0.980 |
SFR04953.1 | SFR06445.1 | SAMN04488564_102655 | SAMN04488564_1021008 | 3-oxo-5alpha-steroid 4-dehydrogenase. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.982 |
SFR04953.1 | SFR20805.1 | SAMN04488564_102655 | SAMN04488564_105339 | 3-oxo-5alpha-steroid 4-dehydrogenase. | Glutamate synthase (NADPH/NADH) large chain. | 0.464 |
SFR04953.1 | SFR26855.1 | SAMN04488564_102655 | SAMN04488564_110199 | 3-oxo-5alpha-steroid 4-dehydrogenase. | Succinyldiaminopimelate transaminase. | 0.402 |
SFR04953.1 | SFR26856.1 | SAMN04488564_102655 | SAMN04488564_110200 | 3-oxo-5alpha-steroid 4-dehydrogenase. | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.883 |
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