Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFQ96710.1 | SFR03666.1 | SAMN04488564_101314 | SAMN04488564_102367 | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | Ferritin-like. | 0.978 |
| SFQ96710.1 | SFR06445.1 | SAMN04488564_101314 | SAMN04488564_1021008 | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.999 |
| SFQ96710.1 | SFR23893.1 | SAMN04488564_101314 | SAMN04488564_107206 | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | Menaquinol-cytochrome c reductase cytochrome b subunit precursor. | 0.983 |
| SFQ96710.1 | SFR23895.1 | SAMN04488564_101314 | SAMN04488564_107207 | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | Menaquinol-cytochrome c reductase iron-sulfur subunit precursor. | 0.978 |
| SFQ96710.1 | SFR23900.1 | SAMN04488564_101314 | SAMN04488564_107209 | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | Cytochrome c oxidase subunit 3. | 0.961 |
| SFQ96710.1 | SFR23910.1 | SAMN04488564_101314 | SAMN04488564_107215 | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.939 |
| SFQ96710.1 | SFR26574.1 | SAMN04488564_101314 | SAMN04488564_11063 | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | Predicted Zn-dependent peptidase. | 0.942 |
| SFQ96710.1 | SFR26576.1 | SAMN04488564_101314 | SAMN04488564_11064 | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | Predicted Zn-dependent peptidase. | 0.942 |
| SFQ96710.1 | SFR29513.1 | SAMN04488564_101314 | SAMN04488564_119157 | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.990 |
| SFR03666.1 | SFQ96710.1 | SAMN04488564_102367 | SAMN04488564_101314 | Ferritin-like. | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | 0.978 |
| SFR03666.1 | SFR06445.1 | SAMN04488564_102367 | SAMN04488564_1021008 | Ferritin-like. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.999 |
| SFR03666.1 | SFR23893.1 | SAMN04488564_102367 | SAMN04488564_107206 | Ferritin-like. | Menaquinol-cytochrome c reductase cytochrome b subunit precursor. | 0.999 |
| SFR03666.1 | SFR23900.1 | SAMN04488564_102367 | SAMN04488564_107209 | Ferritin-like. | Cytochrome c oxidase subunit 3. | 0.997 |
| SFR03666.1 | SFR23910.1 | SAMN04488564_102367 | SAMN04488564_107215 | Ferritin-like. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.991 |
| SFR03666.1 | SFR26574.1 | SAMN04488564_102367 | SAMN04488564_11063 | Ferritin-like. | Predicted Zn-dependent peptidase. | 0.977 |
| SFR03666.1 | SFR26576.1 | SAMN04488564_102367 | SAMN04488564_11064 | Ferritin-like. | Predicted Zn-dependent peptidase. | 0.977 |
| SFR03666.1 | SFR29513.1 | SAMN04488564_102367 | SAMN04488564_119157 | Ferritin-like. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.976 |
| SFR03666.1 | SFR29514.1 | SAMN04488564_102367 | SAMN04488564_119158 | Ferritin-like. | NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.978 |
| SFR06445.1 | SFQ96710.1 | SAMN04488564_1021008 | SAMN04488564_101314 | NAD-dependent formate dehydrogenase flavoprotein subunit. | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | 0.999 |
| SFR06445.1 | SFR03666.1 | SAMN04488564_1021008 | SAMN04488564_102367 | NAD-dependent formate dehydrogenase flavoprotein subunit. | Ferritin-like. | 0.999 |
page 1 of 6