Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFQ97558.1 | SFR27584.1 | SAMN04488564_101470 | SAMN04488564_111120 | Shikimate kinase. | DNA-binding transcriptional regulator, AcrR family. | 0.410 |
SFR18342.1 | SFR22747.1 | SAMN04488564_104787 | SAMN04488564_106345 | Hypothetical protein. | Hypothetical protein. | 0.661 |
SFR18342.1 | SFR27584.1 | SAMN04488564_104787 | SAMN04488564_111120 | Hypothetical protein. | DNA-binding transcriptional regulator, AcrR family. | 0.444 |
SFR18342.1 | SFR28435.1 | SAMN04488564_104787 | SAMN04488564_113283 | Hypothetical protein. | Hypothetical protein. | 0.406 |
SFR22747.1 | SFR18342.1 | SAMN04488564_106345 | SAMN04488564_104787 | Hypothetical protein. | Hypothetical protein. | 0.661 |
SFR22747.1 | SFR27584.1 | SAMN04488564_106345 | SAMN04488564_111120 | Hypothetical protein. | DNA-binding transcriptional regulator, AcrR family. | 0.433 |
SFR22747.1 | SFR28435.1 | SAMN04488564_106345 | SAMN04488564_113283 | Hypothetical protein. | Hypothetical protein. | 0.738 |
SFR27401.1 | SFR27584.1 | SAMN04488564_11131 | SAMN04488564_111120 | Regulatory protein, tetR family. | DNA-binding transcriptional regulator, AcrR family. | 0.515 |
SFR27582.1 | SFR27584.1 | SAMN04488564_111119 | SAMN04488564_111120 | Para-nitrobenzyl esterase. | DNA-binding transcriptional regulator, AcrR family. | 0.675 |
SFR27582.1 | SFR27586.1 | SAMN04488564_111119 | SAMN04488564_111121 | Para-nitrobenzyl esterase. | Hypothetical protein. | 0.493 |
SFR27584.1 | SFQ97558.1 | SAMN04488564_111120 | SAMN04488564_101470 | DNA-binding transcriptional regulator, AcrR family. | Shikimate kinase. | 0.410 |
SFR27584.1 | SFR18342.1 | SAMN04488564_111120 | SAMN04488564_104787 | DNA-binding transcriptional regulator, AcrR family. | Hypothetical protein. | 0.444 |
SFR27584.1 | SFR22747.1 | SAMN04488564_111120 | SAMN04488564_106345 | DNA-binding transcriptional regulator, AcrR family. | Hypothetical protein. | 0.433 |
SFR27584.1 | SFR27401.1 | SAMN04488564_111120 | SAMN04488564_11131 | DNA-binding transcriptional regulator, AcrR family. | Regulatory protein, tetR family. | 0.515 |
SFR27584.1 | SFR27582.1 | SAMN04488564_111120 | SAMN04488564_111119 | DNA-binding transcriptional regulator, AcrR family. | Para-nitrobenzyl esterase. | 0.675 |
SFR27584.1 | SFR27586.1 | SAMN04488564_111120 | SAMN04488564_111121 | DNA-binding transcriptional regulator, AcrR family. | Hypothetical protein. | 0.651 |
SFR27584.1 | SFR27588.1 | SAMN04488564_111120 | SAMN04488564_111122 | DNA-binding transcriptional regulator, AcrR family. | Short chain dehydrogenase. | 0.430 |
SFR27584.1 | SFR27590.1 | SAMN04488564_111120 | SAMN04488564_111123 | DNA-binding transcriptional regulator, AcrR family. | Hypothetical protein. | 0.430 |
SFR27584.1 | SFR28435.1 | SAMN04488564_111120 | SAMN04488564_113283 | DNA-binding transcriptional regulator, AcrR family. | Hypothetical protein. | 0.415 |
SFR27586.1 | SFR27582.1 | SAMN04488564_111121 | SAMN04488564_111119 | Hypothetical protein. | Para-nitrobenzyl esterase. | 0.493 |
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