STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR28323.1Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. (648 aa)    
Predicted Functional Partners:
SFR17813.1
NPCBM-associated, NEW3 domain of alpha-galactosidase.
 
  
 0.755
SFR29294.1
Alpha-mannosidase.
 
  
 0.708
SFR27867.1
F5/8 type C domain-containing protein.
 
   
 0.663
SFR29551.1
Glycosyl hydrolases family 8.
  
     0.624
SFR29550.1
Glycosyl hydrolases family 8.
  
     0.623
SFR29293.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.614
SFR28322.1
Alpha/beta hydrolase family protein.
       0.479
SFR29290.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.477
SFR22581.1
TIGR04222 domain-containing protein.
  
     0.468
SFR28411.1
Peptidase_C39 like family protein.
  
     0.431
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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