STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR28325.1Protein of unknown function. (278 aa)    
Predicted Functional Partners:
SFR28326.1
Hypothetical protein.
       0.782
SFR28327.1
DNA-binding transcriptional regulator, LacI/PurR family.
       0.781
SFR25886.1
Hypothetical protein.
 
     0.752
SFR27009.1
Hypothetical protein.
   
  0.725
SFR28205.1
Unsaturated chondroitin disaccharide hydrolase.
   
  0.725
SFR30137.1
Hypothetical protein.
  
  
 0.712
SFR28324.1
F5/8 type C domain-containing protein.
  
  0.693
SFQ96656.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.657
SFQ96232.1
Protein of unknown function.
 
     0.646
SFR24244.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
  
 0.642
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.