STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR28479.1Two-component system, OmpR family, sensor kinase. (464 aa)    
Predicted Functional Partners:
SFR28198.1
Signal transduction histidine kinase.
   
0.976
SFR28478.1
Two-component system, OmpR family, response regulator.
 
 0.973
SFR29555.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.895
SFR15211.1
Two-component system, OmpR family, response regulator.
 
 0.846
SFR28481.1
Glycosyl transferase family 2.
 
 
 
 0.813
SFR28896.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.808
SFR30054.1
Two-component system, OmpR family, response regulator.
 
 0.807
SFR25362.1
Response regulator receiver domain-containing protein.
   
 0.799
SFR27993.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.794
SFR28480.1
4-amino-4-deoxy-L-arabinose transferase.
 
     0.783
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.