Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFQ99065.1 | SFR18203.1 | SAMN04488564_101774 | SAMN04488564_104739 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Sugar phosphate isomerase/epimerase. | 0.579 |
SFQ99065.1 | SFR24755.1 | SAMN04488564_101774 | SAMN04488564_10851 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 4-hydroxyphenylpyruvate dioxygenase. | 0.400 |
SFQ99065.1 | SFR28536.1 | SAMN04488564_101774 | SAMN04488564_11497 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Sugar phosphate isomerase/epimerase. | 0.755 |
SFQ99065.1 | SFR28537.1 | SAMN04488564_101774 | SAMN04488564_11498 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Dihydrodipicolinate synthase/N-acetylneuraminate lyase. | 0.668 |
SFQ99065.1 | SFR28538.1 | SAMN04488564_101774 | SAMN04488564_11499 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Predicted dehydrogenase. | 0.609 |
SFR18203.1 | SFQ99065.1 | SAMN04488564_104739 | SAMN04488564_101774 | Sugar phosphate isomerase/epimerase. | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.579 |
SFR18203.1 | SFR20260.1 | SAMN04488564_104739 | SAMN04488564_105172 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.657 |
SFR18203.1 | SFR20274.1 | SAMN04488564_104739 | SAMN04488564_105177 | Sugar phosphate isomerase/epimerase. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.657 |
SFR18203.1 | SFR28536.1 | SAMN04488564_104739 | SAMN04488564_11497 | Sugar phosphate isomerase/epimerase. | Sugar phosphate isomerase/epimerase. | 0.422 |
SFR18203.1 | SFR28538.1 | SAMN04488564_104739 | SAMN04488564_11499 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.716 |
SFR18583.1 | SFR20260.1 | SAMN04488564_104854 | SAMN04488564_105172 | 2-keto-myo-inositol dehydratase. | Predicted dehydrogenase. | 0.757 |
SFR18583.1 | SFR20274.1 | SAMN04488564_104854 | SAMN04488564_105177 | 2-keto-myo-inositol dehydratase. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.794 |
SFR18583.1 | SFR28002.1 | SAMN04488564_104854 | SAMN04488564_112113 | 2-keto-myo-inositol dehydratase. | Sugar phosphate isomerase/epimerase. | 0.422 |
SFR18583.1 | SFR28538.1 | SAMN04488564_104854 | SAMN04488564_11499 | 2-keto-myo-inositol dehydratase. | Predicted dehydrogenase. | 0.757 |
SFR20260.1 | SFR18203.1 | SAMN04488564_105172 | SAMN04488564_104739 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.657 |
SFR20260.1 | SFR18583.1 | SAMN04488564_105172 | SAMN04488564_104854 | Predicted dehydrogenase. | 2-keto-myo-inositol dehydratase. | 0.757 |
SFR20260.1 | SFR20274.1 | SAMN04488564_105172 | SAMN04488564_105177 | Predicted dehydrogenase. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.941 |
SFR20260.1 | SFR24755.1 | SAMN04488564_105172 | SAMN04488564_10851 | Predicted dehydrogenase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.585 |
SFR20260.1 | SFR28002.1 | SAMN04488564_105172 | SAMN04488564_112113 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.678 |
SFR20260.1 | SFR28536.1 | SAMN04488564_105172 | SAMN04488564_11497 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.858 |
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