Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR04375.1 | SFR28824.1 | SAMN04488564_102512 | SAMN04488564_115133 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.502 |
SFR09141.1 | SFR09158.1 | SAMN04488564_10381 | SAMN04488564_10384 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | 0.999 |
SFR09141.1 | SFR28824.1 | SAMN04488564_10381 | SAMN04488564_115133 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Ribosomal protein S18 acetylase RimI. | 0.428 |
SFR09141.1 | tsaD | SAMN04488564_10381 | SAMN04488564_10386 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.998 |
SFR09158.1 | SFR09141.1 | SAMN04488564_10384 | SAMN04488564_10381 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.999 |
SFR09158.1 | SFR28824.1 | SAMN04488564_10384 | SAMN04488564_115133 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | Ribosomal protein S18 acetylase RimI. | 0.521 |
SFR09158.1 | tsaD | SAMN04488564_10384 | SAMN04488564_10386 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.999 |
SFR21966.1 | SFR28824.1 | SAMN04488564_10619 | SAMN04488564_115133 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.436 |
SFR25365.1 | SFR26056.1 | SAMN04488564_108338 | SAMN04488564_109207 | Hypothetical protein. | Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.540 |
SFR25365.1 | SFR28824.1 | SAMN04488564_108338 | SAMN04488564_115133 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.430 |
SFR26056.1 | SFR25365.1 | SAMN04488564_109207 | SAMN04488564_108338 | Dolichyl-phosphate-mannose-protein mannosyltransferase. | Hypothetical protein. | 0.540 |
SFR26056.1 | SFR27618.1 | SAMN04488564_109207 | SAMN04488564_111138 | Dolichyl-phosphate-mannose-protein mannosyltransferase. | Hypothetical protein. | 0.624 |
SFR26056.1 | SFR28824.1 | SAMN04488564_109207 | SAMN04488564_115133 | Dolichyl-phosphate-mannose-protein mannosyltransferase. | Ribosomal protein S18 acetylase RimI. | 0.598 |
SFR27618.1 | SFR26056.1 | SAMN04488564_111138 | SAMN04488564_109207 | Hypothetical protein. | Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.624 |
SFR27618.1 | SFR28824.1 | SAMN04488564_111138 | SAMN04488564_115133 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.439 |
SFR28823.1 | SFR28824.1 | SAMN04488564_115132 | SAMN04488564_115133 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.559 |
SFR28824.1 | SFR04375.1 | SAMN04488564_115133 | SAMN04488564_102512 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.502 |
SFR28824.1 | SFR09141.1 | SAMN04488564_115133 | SAMN04488564_10381 | Ribosomal protein S18 acetylase RimI. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.428 |
SFR28824.1 | SFR09158.1 | SAMN04488564_115133 | SAMN04488564_10384 | Ribosomal protein S18 acetylase RimI. | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | 0.521 |
SFR28824.1 | SFR21966.1 | SAMN04488564_115133 | SAMN04488564_10619 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.436 |
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