STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR29070.1Putative restriction endonuclease. (186 aa)    
Predicted Functional Partners:
SFR29071.1
Poly-gamma-glutamate synthesis protein (capsule biosynthesis protein).
       0.777
SFR25412.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.733
SFR29072.1
Carbon monoxide dehydrogenase subunit G.
       0.693
SFR29073.1
Carbon-monoxide dehydrogenase medium subunit.
       0.693
SFR29074.1
Carbon-monoxide dehydrogenase large subunit.
       0.693
SFR29075.1
Carbon-monoxide dehydrogenase small subunit.
       0.693
SFR29076.1
XdhC Rossmann domain-containing protein.
       0.503
SFR24126.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.484
SFR27858.1
Hypothetical protein.
  
     0.461
SFR12246.1
Hypothetical protein.
  
     0.452
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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