Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR27665.1 | SFR29086.1 | SAMN04488564_111163 | SAMN04488564_11710 | Pyridoxamine 5'-phosphate oxidase. | Hypothetical protein. | 0.481 |
SFR27665.1 | SFR29090.1 | SAMN04488564_111163 | SAMN04488564_11714 | Pyridoxamine 5'-phosphate oxidase. | CHAT domain-containing protein. | 0.480 |
SFR28102.1 | SFR29086.1 | SAMN04488564_112213 | SAMN04488564_11710 | CHAT domain-containing protein. | Hypothetical protein. | 0.446 |
SFR28102.1 | SFR29088.1 | SAMN04488564_112213 | SAMN04488564_11712 | CHAT domain-containing protein. | Hypothetical protein. | 0.464 |
SFR28102.1 | SFR29090.1 | SAMN04488564_112213 | SAMN04488564_11714 | CHAT domain-containing protein. | CHAT domain-containing protein. | 0.687 |
SFR28102.1 | nhaA | SAMN04488564_112213 | SAMN04488564_104231 | CHAT domain-containing protein. | Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.507 |
SFR29086.1 | SFR27665.1 | SAMN04488564_11710 | SAMN04488564_111163 | Hypothetical protein. | Pyridoxamine 5'-phosphate oxidase. | 0.481 |
SFR29086.1 | SFR28102.1 | SAMN04488564_11710 | SAMN04488564_112213 | Hypothetical protein. | CHAT domain-containing protein. | 0.446 |
SFR29086.1 | SFR29087.1 | SAMN04488564_11710 | SAMN04488564_11711 | Hypothetical protein. | SEFIR domain-containing protein. | 0.741 |
SFR29086.1 | SFR29088.1 | SAMN04488564_11710 | SAMN04488564_11712 | Hypothetical protein. | Hypothetical protein. | 0.753 |
SFR29086.1 | SFR29089.1 | SAMN04488564_11710 | SAMN04488564_11713 | Hypothetical protein. | NACHT domain-containing protein. | 0.582 |
SFR29086.1 | SFR29090.1 | SAMN04488564_11710 | SAMN04488564_11714 | Hypothetical protein. | CHAT domain-containing protein. | 0.841 |
SFR29086.1 | SFR30175.1 | SAMN04488564_11710 | SAMN04488564_1314 | Hypothetical protein. | Hypothetical protein. | 0.719 |
SFR29086.1 | nhaA | SAMN04488564_11710 | SAMN04488564_104231 | Hypothetical protein. | Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.495 |
SFR29087.1 | SFR29086.1 | SAMN04488564_11711 | SAMN04488564_11710 | SEFIR domain-containing protein. | Hypothetical protein. | 0.741 |
SFR29087.1 | SFR29088.1 | SAMN04488564_11711 | SAMN04488564_11712 | SEFIR domain-containing protein. | Hypothetical protein. | 0.675 |
SFR29087.1 | SFR29089.1 | SAMN04488564_11711 | SAMN04488564_11713 | SEFIR domain-containing protein. | NACHT domain-containing protein. | 0.492 |
SFR29087.1 | SFR29090.1 | SAMN04488564_11711 | SAMN04488564_11714 | SEFIR domain-containing protein. | CHAT domain-containing protein. | 0.449 |
SFR29087.1 | SFR29091.1 | SAMN04488564_11711 | SAMN04488564_11715 | SEFIR domain-containing protein. | CHAT domain-containing protein. | 0.412 |
SFR29087.1 | SFR29092.1 | SAMN04488564_11711 | SAMN04488564_11716 | SEFIR domain-containing protein. | Hypothetical protein. | 0.412 |
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