STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR29115.1Predicted arabinose efflux permease, MFS family. (403 aa)    
Predicted Functional Partners:
SFR29121.1
Amino acid adenylation domain-containing protein.
  
 
 0.849
SFR29119.1
Phosphopantetheine attachment site.
  
 
 0.808
SFR29111.1
Acyl carrier protein.
       0.773
SFR29112.1
HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain-containing protein.
       0.773
SFR29113.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
       0.773
SFR29114.1
Lysine/ornithine N-monooxygenase.
       0.773
SFR29116.1
MbtH protein.
       0.773
SFR29117.1
Hypothetical protein.
       0.773
SFR29118.1
Penicillin amidase.
       0.773
SFR29120.1
Amino acid adenylation domain-containing protein.
       0.773
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
Server load: low (14%) [HD]