STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR30112.1Serine/threonine protein kinase. (655 aa)    
Predicted Functional Partners:
SFR28571.1
FHA domain-containing protein.
  
 
 
 0.872
SFQ99849.1
Protein phosphatase.
 
 0.852
SFR11273.1
Protein phosphatase.
 
 0.852
SFR17103.1
Protein phosphatase.
 
 0.850
SFR27481.1
Serine/threonine protein phosphatase PrpC.
  
  0.827
SFR28198.1
Signal transduction histidine kinase.
   
 0.809
SFR17325.1
Hypothetical protein.
 
  
 0.622
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.601
SFR23826.1
Serine/threonine protein kinase.
 
 
0.568
SFR17127.1
Serine/threonine protein kinase.
 
 
0.567
Your Current Organism:
Lentzea waywayandensis
NCBI taxonomy Id: 84724
Other names: ATCC 51594, DSM 44232, IFO 14970, JCM 9114, L. waywayandensis, NBRC 14970, NRRL B-16159, Saccharothrix waywayandensis, strain LL-37Z-15
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