STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS16Small subunit ribosomal protein S16e. (146 aa)    
Predicted Functional Partners:
RPL11
Large subunit ribosomal protein L11e.
  
 0.999
RPS24
Small subunit ribosomal protein S24e.
   
 0.999
RPL19
Large subunit ribosomal protein L19e.
  
 0.999
RPS18
Small subunit ribosomal protein S18e.
  
 0.999
RPL24
Large subunit ribosomal protein L24e.
  
 0.999
RPL18
Large subunit ribosomal protein L18e.
  
 0.999
ENSCPBP00000007027
annotation not available
   
 0.999
EIF1AY
Eukaryotic translation initiation factor 1A, X-linked.
  
 0.999
RPS17
Small subunit ribosomal protein S17e.
   
 0.999
RPL6
Large subunit ribosomal protein L6e.
  
 0.999
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.