STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRQProtein tyrosine phosphatase, receptor type Q. (2321 aa)    
Predicted Functional Partners:
MYO6
Myosin VI.
    
 
 0.579
OTOGL
Otogelin like.
 
 
 0.533
MANF
Mesencephalic astrocyte derived neurotrophic factor.
     
 0.493
E2F7
Transcription factor E2F7/8.
      
 0.483
RBBP6
RB binding protein 6, ubiquitin ligase.
      
 0.475
TPRN
Taperin.
      
 0.440
TMTC4
Transmembrane O-mannosyltransferase targeting cadherins 4.
    
 0.431
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.