STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPFIA2PTPRF interacting protein alpha 2. (1227 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.977
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.838
PPFIBP2
PPFIA binding protein 2.
   
0.683
PPFIBP1
PPFIA binding protein 1.
   
0.683
GIT1
G protein-coupled receptor kinase interactor 1.
    
 
 0.599
GIT2
G protein-coupled receptor kinase interactor 2.
    
 
 0.599
MPP1
MAGUK 55 kDa erythrocyte membrane protein.
    
 0.588
ENSCPBP00000025770
annotation not available
    
 0.545
UNC13B
Protein unc-13 A/B/C.
    
 0.545
UNC13C
Protein unc-13 A/B/C.
    
 0.545
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.