STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC59Coiled-coil domain containing 59. (204 aa)    
Predicted Functional Partners:
LLPH
LLP homolog, long-term synaptic facilitation.
   
    0.803
SFTPB
Surfactant protein B.
     
 0.496
MRPL55
Large subunit ribosomal protein L55.
      
 0.485
ENSCPBP00000034462
annotation not available
      
 0.452
CCDC58
Coiled-coil domain containing 58.
   
    0.441
DENR
Density regulated re-initiation and release factor.
   
    0.437
RWDD1
RWD domain containing 1.
   
    0.408
BRIX1
Ribosome biogenesis protein BRX1.
   
    0.407
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.