STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCUN1D1Defective in cullin neddylation 1 domain containing 1. (266 aa)    
Predicted Functional Partners:
RBX1
RING-box protein 1.
    
 0.877
CUL1
Cullin 1.
   
 0.873
CUL3
Cullin 3.
   
 0.860
UBE2M
Ubiquitin conjugating enzyme E2 M.
    
 0.836
NEDD8
Neural precursor cell expressed, developmentally down-regulated 8.
    
 0.835
UBE2F
Ubiquitin conjugating enzyme E2 F (putative).
    
 0.808
CUL2
Cullin 2.
   
 0.779
CUL5
Cullin 5.
   
 0.765
COPS5
COP9 signalosome complex subunit 5.
    
 0.701
UBA3
Ubiquitin like modifier activating enzyme 3.
   
 0.691
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.