STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC61BProtein transport protein SEC61 subunit beta. (130 aa)    
Predicted Functional Partners:
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.998
FAU
FAU, ubiquitin like and ribosomal protein S30 fusion.
   
  0.998
SEC61G
Protein transport protein SEC61 subunit gamma and related proteins.
   
 0.998
SEC61A1
Protein transport protein SEC61 subunit alpha.
   
 0.983
SEC61A2
Protein transport protein SEC61 subunit alpha.
   
 0.983
SSR2
Translocon-associated protein subunit beta.
   
 0.930
SSR3
Translocon-associated protein subunit gamma.
   
  0.915
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
   
 0.902
SEC62
SEC62 homolog, preprotein translocation factor.
    
 
 0.892
RPN1
Oligosaccharyltransferase complex subunit alpha (ribophorin I).
   
 0.888
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.