STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUPV3L1ATP-dependent RNA helicase SUPV3L1/SUV3. (687 aa)    
Predicted Functional Partners:
ELAC2
ElaC ribonuclease Z 2.
   
  
 0.795
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
   
 
 0.770
DIS3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease.
   
 
 0.762
DIS3L
DIS3 like exosome 3'-5' exoribonuclease.
   
 
 0.762
HELZ2
Helicase with zinc finger 2.
   
 
 0.762
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
   
 
 0.762
POLRMT
RNA polymerase mitochondrial.
   
 
 0.630
FASTKD2
FAST kinase domains 2.
   
  
 0.605
CASQ2
Calsequestrin 2.
    
 
 0.599
ATP6
F-type H+-transporting ATPase subunit a.
      
 0.594
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.