STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTLL7Tubulin tyrosine ligase like 7. (993 aa)    
Predicted Functional Partners:
SVBP
Small vasohibin binding protein.
      
 0.672
TTLL5
Tubulin tyrosine ligase like 5.
   
  
 0.595
CCSAP
Centriole, cilia and spindle associated protein.
      
 0.569
ZNF142
Zinc finger protein 142.
      
 0.564
TTLL3
Tubulin monoglycylase TTLL3/8.
   
  
 0.547
KIF3A
Kinesin family member 3A.
      
 0.525
ENSCPBP00000018199
RUN and FYVE domain-containing protein 4-like.
      
 0.465
EFCAB2
EF-hand calcium binding domain 2.
      
 0.456
TFAP2D
Transcription factor AP-2 delta.
      
 0.455
CDC42EP1
CDC42 effector protein 1.
      
 0.452
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.