STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMCHD1Structural maintenance of chromosomes flexible hinge domain-containing protein 1. (1990 aa)    
Predicted Functional Partners:
LRIF1
Ligand dependent nuclear receptor interacting factor 1.
    
 
 0.629
METTL4
N(6)-adenine-specific DNA methyltransferase.
   
  
 0.591
MACROH2A2
Core histone macro-H2A.2.
      
 0.580
PDS5A
Sister chromatid cohesion protein PDS5.
   
  
 0.573
ENSCPBP00000036866
annotation not available
      
 0.546
SCAF11
SR-related CTD associated factor 11.
   
    0.517
AHCTF1
AT-hook containing transcription factor 1.
   
  
 0.499
MACROH2A1
Core histone macro-H2A.1.
      
 0.479
NUP133
Nuclear pore complex protein Nup133.
   
  
 0.466
DMXL1
DmX-like protein.
   
    0.447
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.