Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RXYLT1Alpha-dystroglycan beta1,4-xylosyltransferase. (452 aa)    
Predicted Functional Partners:
FKTN
Fukutin.
   
 0.997
FKRP
Fukutin related protein.
    
 0.994
B4GAT1
Beta-1,4-glucuronyltransferase 1.
   
 
 0.989
POMGNT1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
    
 0.965
LARGE1
LARGE xylosyl- and glucuronyltransferase 1.
  
 
 0.948
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
  
 
 0.905
POMK
Glycoprotein-mannosyl O6-kinase.
      
 0.877
POMGNT2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
      
 0.876
B3GALNT2
Beta-1,3-N-acetylgalactosaminyltransferase 2.
   
  
 0.867
POMT1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
   
  
 0.854
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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