STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RXYLT1Alpha-dystroglycan beta1,4-xylosyltransferase. (452 aa)    
Predicted Functional Partners:
B4GAT1
Beta-1,4-glucuronyltransferase 1.
   
 
 0.968
FKRP
Fukutin related protein.
     
 0.966
FKTN
Fukutin.
   
 
 0.734
B3GALNT2
Beta-1,3-N-acetylgalactosaminyltransferase 2.
   
  
 0.680
POMK
Glycoprotein-mannosyl O6-kinase.
      
 0.665
POMGNT2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
      
 0.658
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
  
  
 0.655
LARGE1
LARGE xylosyl- and glucuronyltransferase 1.
  
  
 0.635
POMGNT1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
    
 
 0.634
CRPPA
D-ribitol-5-phosphate cytidylyltransferase.
  
   
 0.634
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.